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» On the Average-Case Complexity of Property Testing
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BMCBI
2007
157views more  BMCBI 2007»
15 years 1 months ago
Constructing gene co-expression networks and predicting functions of unknown genes by random matrix theory
Background: Large-scale sequencing of entire genomes has ushered in a new age in biology. One of the next grand challenges is to dissect the cellular networks consisting of many i...
Feng Luo, Yunfeng Yang, Jianxin Zhong, Haichun Gao...
BMCBI
2007
152views more  BMCBI 2007»
15 years 1 months ago
Recodon: Coalescent simulation of coding DNA sequences with recombination, migration and demography
Background: Coalescent simulations have proven very useful in many population genetics studies. In order to arrive to meaningful conclusions, it is important that these simulation...
Miguel Arenas, David Posada
ICALP
2009
Springer
16 years 1 months ago
LTL Path Checking Is Efficiently Parallelizable
We present an AC1 (logDCFL) algorithm for checking LTL formulas over finite paths, thus establishing that the problem can be efficiently parallelized. Our construction provides a f...
Lars Kuhtz, Bernd Finkbeiner
POPL
2010
ACM
15 years 10 months ago
Compositional May-Must Program Analysis: Unleashing the Power of Alternation
Program analysis tools typically compute two types of information: (1) may information that is true of all program executions and is used to prove the absence of bugs in the progr...
Aditya V. Nori, Patrice Godefroid, SaiDeep Tetali,...
BMCBI
2006
195views more  BMCBI 2006»
15 years 1 months ago
Hubs of knowledge: using the functional link structure in Biozon to mine for biologically significant entities
Background: Existing biological databases support a variety of queries such as keyword or definition search. However, they do not provide any measure of relevance for the instance...
Paul Shafer, Timothy Isganitis, Golan Yona