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» On the Complexity of Computing Evolutionary Trees
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BMCBI
2005
122views more  BMCBI 2005»
14 years 9 months ago
Bayesian coestimation of phylogeny and sequence alignment
Background: Two central problems in computational biology are the determination of the alignment and phylogeny of a set of biological sequences. The traditional approach to this p...
Gerton Lunter, István Miklós, Alexei...
ALGORITHMICA
2006
163views more  ALGORITHMICA 2006»
14 years 10 months ago
Building Large Phylogenetic Trees on Coarse-Grained Parallel Machines
Phylogenetic analysis is an area of computational biology concerned with the reconstruction of evolutionary relationships between organisms, genes, and gene families. Maximum likel...
Thomas M. Keane, Andrew J. Page, Thomas J. Naughto...
CCS
2007
ACM
15 years 4 months ago
Optimal security hardening using multi-objective optimization on attack tree models of networks
Researchers have previously looked into the problem of determining if a given set of security hardening measures can effectively make a networked system secure. Many of them also...
Rinku Dewri, Nayot Poolsappasit, Indrajit Ray, Dar...
ISMB
2003
14 years 11 months ago
Deriving phylogenetic trees from the similarity analysis of metabolic pathways
Comparative analysis of metabolic pathways in different genomes can give insights into the understanding of evolutionary and organizational relationships among species. This type ...
Maureen Heymans, Ambuj K. Singh
GECCO
2007
Springer
190views Optimization» more  GECCO 2007»
15 years 4 months ago
Analysis of evolutionary algorithms for the longest common subsequence problem
In the longest common subsequence problem the task is to find the longest sequence of letters that can be found as subsequence in all members of a given finite set of sequences....
Thomas Jansen, Dennis Weyland