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» On the Complexity of Computing Evolutionary Trees
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WSC
2004
14 years 11 months ago
Simulating Growth Dynamics in Complex Adaptive Supply Networks
This paper discusses an extended adaptive supply network simulation model that explicitly captures growth (in terms of change in size over time, and birth and death) based on Utte...
Surya Dev Pathak, David M. Dilts, Gautam Biswas
SAC
2004
ACM
15 years 3 months ago
Frequent free tree discovery in graph data
In recent years, researchers in graph mining have been exploring linear paths as well as subgraphs as pattern languages. In this paper, we are investigating the middle ground betw...
Ulrich Rückert, Stefan Kramer
FEGC
2008
104views Biometrics» more  FEGC 2008»
14 years 11 months ago
Mining Implications from Lattices of Closed Trees
We propose a way of extracting high-confidence association rules from datasets consisting of unlabeled trees. The antecedents are obtained through a computation akin to a hypergrap...
José L. Balcázar, Albert Bifet, Anto...
RECOMB
2005
Springer
15 years 10 months ago
Decomposition of Overlapping Protein Complexes: A Graph Theoretical Method for Analyzing Static and Dynamic Protein Associations
Background: Most cellular processes are carried out by multi-protein complexes, groups of proteins that bind together to perform a specific task. Some proteins form stable complex...
Elena Zotenko, Katia S. Guimarães, Raja Jot...
BMCBI
2008
175views more  BMCBI 2008»
14 years 10 months ago
Comprehensive inventory of protein complexes in the Protein Data Bank from consistent classification of interfaces
Background: Protein-protein interactions are ubiquitous and essential for all cellular processes. High-resolution X-ray crystallographic structures of protein complexes can reveal...
Andrew J. Bordner, Andrey A. Gorin