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» On the Complexity of Exclusion Algorithms for Optimization
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BMCBI
2007
144views more  BMCBI 2007»
14 years 11 months ago
Accelerated search for biomolecular network models to interpret high-throughput experimental data
Background: The functions of human cells are carried out by biomolecular networks, which include proteins, genes, and regulatory sites within DNA that encode and control protein e...
Suman Datta, Bahrad A. Sokhansanj
CORR
2007
Springer
90views Education» more  CORR 2007»
14 years 11 months ago
Discrete Denoising with Shifts
We introduce S-DUDE, a new algorithm for denoising Discrete Memoryless Channel (DMC)-corrupted data. The algorithm, which generalizes the recently introduced DUDE (Discrete Univer...
Taesup Moon, Tsachy Weissman
SIAMSC
2008
131views more  SIAMSC 2008»
14 years 11 months ago
Fast Monte Carlo Simulation Methods for Biological Reaction-Diffusion Systems in Solution and on Surfaces
Many important physiological processes operate at time and space scales far beyond those accessible to atom-realistic simulations, and yet discrete stochastic rather than continuum...
Rex A. Kerr, Thomas M. Bartol, Boris Kaminsky, Mar...
TCS
2008
14 years 11 months ago
Competitive graph searches
We exemplify an optimization criterion for divide-and-conquer algorithms with a technique called generic competitive graph search. The technique is then applied to solve two probl...
Binh-Minh Bui-Xuan, Michel Habib, Christophe Paul
TSC
2008
209views more  TSC 2008»
14 years 11 months ago
Effective Web Service Composition in Diverse and Large-Scale Service Networks
Web services are considered to be a potential silver bullet for the envisioned Service Oriented Architecture, in which loosely coupled software components are published, located, a...
Seog-Chan Oh, Dongwon Lee, Soundar R. T. Kumara