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» On the Design of Codes for DNA Computing
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JCB
1998
129views more  JCB 1998»
14 years 11 months ago
A Sticker-Based Model for DNA Computation
We introduce a new model of molecular computation that we call the sticker model. Like many previous proposals it makes use of DNA strands as the physical substrate in which infor...
Sam T. Roweis, Erik Winfree, Richard Burgoyne, Nic...
MCU
1998
119views Hardware» more  MCU 1998»
15 years 1 months ago
DNA Computing Based on Splicing: Universality Results
The paper extends some of the most recently obtained results on the computational universality of speci c variants of H systems (e.g. with regular sets of rules) and proves that we...
Gheorghe Paun
NGC
2002
Springer
14 years 11 months ago
DNA Sequence Design Using Templates
Sequence design is a crucial problem in information-based biotechnology such as DNA-based computation. We introduce a simple strategy named template method that systematically gene...
Masanori Arita, Satoshi Kobayashi
RECOMB
2007
Springer
15 years 12 months ago
Design of Compact, Universal DNA Microarrays for Protein Binding Microarray Experiments
Our group has recently developed a compact, universal protein binding microarray (PBM) that can be used to determine the binding preferences of transcription factors (TFs) [1]. Thi...
Anthony A. Philippakis, Aaron M. Qureshi, Michael ...
DNA
2009
Springer
158views Bioinformatics» more  DNA 2009»
15 years 6 months ago
Design of a Biomolecular Device That Executes Process Algebra
Process algebras are widely used for defining the formal semantics of concurrent communicating processes. In process algebra, concurrent processes can be specified to execute di...
Urmi Majumder, John H. Reif