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» On the Design of Codes for DNA Computing
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BMCBI
2010
116views more  BMCBI 2010»
14 years 12 months ago
Predicting success of oligomerized pool engineering (OPEN) for zinc finger target site sequences
Background: Precise and efficient methods for gene targeting are critical for detailed functional analysis of genomes and regulatory networks and for potentially improving the eff...
Jeffry D. Sander, Deepak Reyon, Morgan L. Maeder, ...
102
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BMCBI
2010
136views more  BMCBI 2010»
14 years 12 months ago
The IronChip evaluation package: a package of perl modules for robust analysis of custom microarrays
Background: Gene expression studies greatly contribute to our understanding of complex relationships in gene regulatory networks. However, the complexity of array design, producti...
Yevhen Vainshtein, Mayka Sanchez, Alvis Brazma, Ma...
CRYPTO
1999
Springer
109views Cryptology» more  CRYPTO 1999»
15 years 4 months ago
Coding Constructions for Blacklisting Problems without Computational Assumptions
Abstract. We consider the broadcast exclusion problem: how to transmit a message over a broadcast channel shared by N = 2n users so that all but some specified coalition of k excl...
Ravi Kumar, Sridhar Rajagopalan, Amit Sahai
BMCBI
2004
207views more  BMCBI 2004»
14 years 11 months ago
Computational identification of transcription factor binding sites by functional analysis of sets of genes sharing overrep-resen
Background: Transcriptional regulation is a key mechanism in the functioning of the cell, and is mostly effected through transcription factors binding to specific recognition moti...
Davide Corà, Ferdinando Di Cunto, Paolo Pro...
ICCS
2005
Springer
15 years 5 months ago
"Plug-and-Play" Cluster Computing HPC Designed for the Mainstream Scientist
At UCLA's Plasma Physics Group, to achieve accessible computational power for our research goals, we developed the tools to build numerically-intensive parallel computing clus...
Dean E. Dauger, Viktor K. Decyk