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RECOMB
2007
Springer
15 years 10 months ago
Minimizing and Learning Energy Functions for Side-Chain Prediction
Abstract. Side-chain prediction is an important subproblem of the general protein folding problem. Despite much progress in side-chain prediction, performance is far from satisfact...
Chen Yanover, Ora Schueler-Furman, Yair Weiss
74
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ATAL
2009
Springer
14 years 11 months ago
Efficient physics-based planning: sampling search via non-deterministic tactics and skills
Motion planning for mobile agents, such as robots, acting in the physical world is a challenging task, which traditionally concerns safe obstacle avoidance. We are interested in p...
Stefan Zickler, Manuela M. Veloso
ALMOB
2008
85views more  ALMOB 2008»
14 years 10 months ago
Noisy: Identification of problematic columns in multiple sequence alignments
Motivation: Sequence-based methods for phylogenetic reconstruction from (nucleic acid) sequence data are notoriously plagued by two effects: homoplasies and alignment errors. Larg...
Andreas W. M. Dress, Christoph Flamm, Guido Fritzs...
TC
2010
14 years 8 months ago
Scalable Node-Level Computation Kernels for Parallel Exact Inference
—In this paper, we investigate data parallelism in exact inference with respect to arbitrary junction trees. Exact inference is a key problem in exploring probabilistic graphical...
Yinglong Xia, Viktor K. Prasanna
AAAI
2011
13 years 10 months ago
Logistic Methods for Resource Selection Functions and Presence-Only Species Distribution Models
In order to better protect and conserve biodiversity, ecologists use machine learning and statistics to understand how species respond to their environment and to predict how they...
Steven Phillips, Jane Elith