We describe algorithms to explore the space of all possible reconciliations between a gene tree and a species tree. We propose an algorithm for generating a random reconciliation, ...
Abstract. Size fair and homologous crossover genetic operators for tree based genetic programming are described and tested. Both produce considerably reduced increases in program s...
Abstract. Simple families of increasing trees can be constructed from simply generated tree families, if one considers for every tree of size n all its increasing labellings, i.e.,...
Motivation: The availability of genome-wide location analyses based on chromatin immunoprecipitation (ChIP) data gives a new insight for in silico analysis of transcriptional regu...
Abstract—We introduce and validate Spatiotemporal Relational Random Forests, which are random forests created with spatiotemporal relational probability trees. We build on the do...
Timothy A. Supinie, Amy McGovern, John Williams, J...