Background: We provide a systematic study of the sources of variability in expression profiling data using 56 RNAs isolated from human muscle biopsies (34 Affymetrix MuscleChip ar...
Marina Bakay, Yi-Wen Chen, Rehannah H. A. Borup, P...
This paper describes a parallel implementation of our recently developed algorithm for phylogenetic analysis on the IBM BlueGene/L cluster [15]. This algorithm constructs evolutio...
Bing Bing Zhou, Daniel Chu, Monther Tarawneh, Ping...
Background: The Gene Ontology (GO) Consortium organizes genes into hierarchical categories based on biological process, molecular function and subcellular localization. Tools such...
Barry Zeeberg, Hongfang Liu, Ari B. Kahn, Martin E...
We propose a novel framework for constrained spectral
clustering with pairwise constraints which specify whether
two objects belong to the same cluster or not. Unlike previous
m...
Zhenguo Li (The Chinese University of Hong Kong), ...
An algorithm for combining results of different clusterings is presented in this paper, the objective of which is to find groups of patterns which are common to all clusterings. T...