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» On the Effectiveness of Constraints Sets in Clustering Genes
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ECML
2006
Springer
15 years 1 months ago
An Adaptive Kernel Method for Semi-supervised Clustering
Semi-supervised clustering uses the limited background knowledge to aid unsupervised clustering algorithms. Recently, a kernel method for semi-supervised clustering has been introd...
Bojun Yan, Carlotta Domeniconi
BMCBI
2007
116views more  BMCBI 2007»
14 years 9 months ago
Ranked Adjusted Rand: integrating distance and partition information in a measure of clustering agreement
Background: Biological information is commonly used to cluster or classify entities of interest such as genes, conditions, species or samples. However, different sources of data c...
Francisco R. Pinto, João A. Carriço,...
BMCBI
2010
154views more  BMCBI 2010»
14 years 6 months ago
Knowledge-based matrix factorization temporally resolves the cellular responses to IL-6 stimulation
Background: External stimulations of cells by hormones, cytokines or growth factors activate signal transduction pathways that subsequently induce a re-arrangement of cellular gen...
Andreas Kowarsch, Florian Blöchl, Sebastian B...
TCBB
2008
107views more  TCBB 2008»
14 years 9 months ago
Coclustering of Human Cancer Microarrays Using Minimum Sum-Squared Residue Coclustering
It is a consensus in microarray analysis that identifying potential local patterns, characterized by coherent groups of genes and conditions, may shed light on the discovery of pre...
Hyuk Cho, Inderjit S. Dhillon
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IDA
2005
Springer
15 years 3 months ago
From Local Pattern Mining to Relevant Bi-cluster Characterization
Clustering or bi-clustering techniques have been proved quite useful in many application domains. A weakness of these techniques remains the poor support for grouping characterizat...
Ruggero G. Pensa, Jean-François Boulicaut