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BMCBI
2007
202views more  BMCBI 2007»
14 years 11 months ago
ProtNet: a tool for stochastic simulations of protein interaction networks dynamics
Background: Protein interactions support cell organization and mediate its response to any specific stimulus. Recent technological advances have produced large data-sets that aim ...
Massimo Bernaschi, Filippo Castiglione, Alessandra...
108
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JCB
2008
106views more  JCB 2008»
14 years 11 months ago
Statistics of Random Protein Superpositions: p-Values for Pairwise Structure Alignment
Quantification of statistical significance is essential for the interpretation of protein structural similarity. To address this, a random model for protein structure comparison w...
James O. Wrabl, Nick V. Grishin
JMLR
2006
113views more  JMLR 2006»
14 years 11 months ago
On Inferring Application Protocol Behaviors in Encrypted Network Traffic
Several fundamental security mechanisms for restricting access to network resources rely on the ability of a reference monitor to inspect the contents of traffic as it traverses t...
Charles V. Wright, Fabian Monrose, Gerald M. Masso...
SIAMDM
2008
79views more  SIAMDM 2008»
14 years 11 months ago
Testing Triangle-Freeness in General Graphs
In this paper we consider the problem of testing whether a graph is triangle-free, and more generally, whether it is H-free, for a fixed subgraph H. The algorithm should accept gr...
Noga Alon, Tali Kaufman, Michael Krivelevich, Dana...
TEC
2008
115views more  TEC 2008»
14 years 11 months ago
Function Approximation With XCS: Hyperellipsoidal Conditions, Recursive Least Squares, and Compaction
An important strength of learning classifier systems (LCSs) lies in the combination of genetic optimization techniques with gradient-based approximation techniques. The chosen app...
Martin V. Butz, Pier Luca Lanzi, Stewart W. Wilson