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CEC
2011
IEEE
13 years 10 months ago
Comparing alternative energy functions for the HP model of protein structure prediction
Abstract—Protein structure prediction is the problem of finding the functional conformation of a protein given only its amino uence. The HP lattice model is an abstract formulat...
Mario Garza-Fabre, Eduardo Rodriguez-Tello, Gregor...
BMCBI
2005
134views more  BMCBI 2005»
14 years 10 months ago
Ancestral sequence alignment under optimal conditions
Background: Multiple genome alignment is an important problem in bioinformatics. An important subproblem used by many multiple alignment approaches is that of aligning two multipl...
Alexander K. Hudek, Daniel G. Brown 0001
AINA
2009
IEEE
15 years 5 months ago
Reliability-Driven Reputation Based Scheduling for Public-Resource Computing Using GA
— For an application in public-resource computing environments, providing reliable scheduling based on resource reliability evaluation is becoming increasingly important. Most ex...
Xiaofeng Wang, Chee Shin Yeo, Rajkumar Buyya, Jins...
WABI
2009
Springer
162views Bioinformatics» more  WABI 2009»
15 years 4 months ago
Aligning Biomolecular Networks Using Modular Graph Kernels
Comparative analysis of biomolecular networks constructed using measurements from different conditions, tissues, and organisms offer a powerful approach to understanding the stru...
Fadi Towfic, M. Heather West Greenlee, Vasant Hona...
TSP
2008
120views more  TSP 2008»
14 years 10 months ago
Distributed Average Consensus With Dithered Quantization
In this paper, we develop algorithms for distributed computation of averages of the node data over networks with bandwidth/power constraints or large volumes of data. Distributed ...
Tuncer C. Aysal, Mark Coates, Michael Rabbat