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» On the Generation of Spatiotemporal Datasets
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BMCBI
2006
171views more  BMCBI 2006»
14 years 10 months ago
The effect of oligonucleotide microarray data pre-processing on the analysis of patient-cohort studies
Background: Intensity values measured by Affymetrix microarrays have to be both normalized, to be able to compare different microarrays by removing non-biological variation, and s...
Roel G. W. Verhaak, Frank J. T. Staal, Peter J. M....
ICDE
2008
IEEE
195views Database» more  ICDE 2008»
15 years 11 months ago
Scalable Rule-Based Gene Expression Data Classification
Abstract-- Current state-of-the-art association rule-based classifiers for gene expression data operate in two phases: (i) Association rule mining from training data followed by (i...
Mark A. Iwen, Willis Lang, Jignesh M. Patel
SSDBM
2010
IEEE
153views Database» more  SSDBM 2010»
15 years 2 months ago
Scalable Clustering Algorithm for N-Body Simulations in a Shared-Nothing Cluster
Abstract. Scientists’ ability to generate and collect massive-scale datasets is increasing. As a result, constraints in data analysis capability rather than limitations in the av...
YongChul Kwon, Dylan Nunley, Jeffrey P. Gardner, M...
BMCBI
2010
147views more  BMCBI 2010»
14 years 10 months ago
Indirect two-sided relative ranking: a robust similarity measure for gene expression data
Background: There is a large amount of gene expression data that exists in the public domain. This data has been generated under a variety of experimental conditions. Unfortunatel...
Louis Licamele, Lise Getoor
BMCBI
2007
114views more  BMCBI 2007»
14 years 10 months ago
Probabilistic prediction and ranking of human protein-protein interactions
Background: Although the prediction of protein-protein interactions has been extensively investigated for yeast, few such datasets exist for the far larger proteome in human. Furt...
Michelle S. Scott, Geoffrey J. Barton