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BMCBI
2004
106views more  BMCBI 2004»
14 years 11 months ago
ESTIMA, a tool for EST management in a multi-project environment
Background: Single-pass, partial sequencing of complementary DNA (cDNA) libraries generates thousands of chromatograms that are processed into high quality expressed sequence tags...
Charu G. Kumar, Richard LeDuc, George Gong, Levan ...
123
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BMCBI
2004
177views more  BMCBI 2004»
14 years 11 months ago
Gapped alignment of protein sequence motifs through Monte Carlo optimization of a hidden Markov model
Background: Certain protein families are highly conserved across distantly related organisms and belong to large and functionally diverse superfamilies. The patterns of conservati...
Andrew F. Neuwald, Jun S. Liu
92
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DIMVA
2010
15 years 1 months ago
HookScout: Proactive Binary-Centric Hook Detection
Abstract. In order to obtain and maintain control, kernel malware usually makes persistent control flow modifications (i.e., installing hooks). To avoid detection, malware develope...
Heng Yin, Pongsin Poosankam, Steve Hanna, Dawn Xia...
HASKELL
2009
ACM
15 years 6 months ago
A compositional theory for STM Haskell
We address the problem of reasoning about Haskell programs that use Software Transactional Memory (STM). As a motivating example, we consider Haskell code for a concurrent non-det...
Johannes Borgström, Karthikeyan Bhargavan, An...
SIGSOFT
2005
ACM
16 years 12 days ago
Matching execution histories of program versions
We develop a method for matching dynamic histories of program executions of two program versions. The matches produced can be useful in many applications including software piracy...
Xiangyu Zhang, Rajiv Gupta