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» On the Interactive Complexity of Graph Reliability
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91
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BMCBI
2008
121views more  BMCBI 2008»
14 years 11 months ago
GeneTrailExpress: a web-based pipeline for the statistical evaluation of microarray experiments
Background: High-throughput methods that allow for measuring the expression of thousands of genes or proteins simultaneously have opened new avenues for studying biochemical proce...
Andreas Keller, Christina Backes, Maher Al-Awadhi,...
BMCBI
2007
162views more  BMCBI 2007»
14 years 11 months ago
Three-Dimensional Phylogeny Explorer: Distinguishing paralogs, lateral transfer, and violation of "molecular clock" assumption w
Background: Construction and interpretation of phylogenetic trees has been a major research topic for understanding the evolution of genes. Increases in sequence data and complexi...
Namshin Kim, Christopher Lee
BMCBI
2007
200views more  BMCBI 2007»
14 years 11 months ago
BNDB - The Biochemical Network Database
Background: Technological advances in high-throughput techniques and efficient data acquisition methods have resulted in a massive amount of life science data. The data is stored ...
Jan Küntzer, Christina Backes, Torsten Blum, ...
115
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JCB
2006
129views more  JCB 2006»
14 years 11 months ago
GenRate: A Generative Model that Reveals Novel Transcripts in Genome-Tiling Microarray Data
Genome-wide microarray designs containing millions to hundreds of millions of probes are available for a variety of mammals, including mouse and human. These genome tiling arrays ...
Brendan J. Frey, Quaid Morris, Timothy R. Hughes
107
Voted
TCAD
1998
114views more  TCAD 1998»
14 years 11 months ago
Behavioral optimization using the manipulation of timing constraints
— We introduce a transformation, named rephasing, that manipulates the timing parameters in control-data-flow graphs (CDFG’s) during the high-level synthesis of data-pathinten...
Miodrag Potkonjak, Mani B. Srivastava