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» On the Meaning of Logical Completeness
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BMCBI
2008
193views more  BMCBI 2008»
14 years 10 months ago
Missing value imputation for microarray gene expression data using histone acetylation information
Background: It is an important pre-processing step to accurately estimate missing values in microarray data, because complete datasets are required in numerous expression profile ...
Qian Xiang, Xianhua Dai, Yangyang Deng, Caisheng H...
BMCBI
2006
160views more  BMCBI 2006»
14 years 10 months ago
Gene prediction in eukaryotes with a generalized hidden Markov model that uses hints from external sources
Background: In order to improve gene prediction, extrinsic evidence on the gene structure can be collected from various sources of information such as genome-genome comparisons an...
Mario Stanke, Oliver Schöffmann, Burkhard Mor...
TOCS
2008
154views more  TOCS 2008»
14 years 9 months ago
Adaptive work-stealing with parallelism feedback
We present an adaptive work-stealing thread scheduler, ASTEAL, for fork-join multithreaded jobs, like those written using the Cilk multithreaded language or the Hood work-stealing...
Kunal Agrawal, Charles E. Leiserson, Yuxiong He, W...
CANDC
2005
ACM
14 years 9 months ago
Comments on selected fundamental aspects of microarray analysis
Microarrays are becoming a ubiquitous tool of research in life sciences. However, the working principles of microarray-based methodologies are often misunderstood or apparently ig...
Alessandra Riva, Anne-Sophie Carpentier, Bruno Tor...
BMCBI
2004
102views more  BMCBI 2004»
14 years 9 months ago
FRAGS: estimation of coding sequence substitution rates from fragmentary data
Background: Rates of substitution in protein-coding sequences can provide important insights into evolutionary processes that are of biomedical and theoretical interest. Increased...
Estienne C. Swart, Winston A. Hide, Cathal Seoighe