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» On the Multiple Gene Duplication Problem
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90
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CF
2006
ACM
15 years 5 months ago
Memory efficient parallel matrix multiplication operation for irregular problems
Regular distributions for storing dense matrices on parallel systems are not always used in practice. In many scientific applicati RUMMA) [1] to handle irregularly distributed mat...
Manojkumar Krishnan, Jarek Nieplocha
79
Voted
BMCBI
2008
122views more  BMCBI 2008»
14 years 12 months ago
Effects of dependence in high-dimensional multiple testing problems
Background: We consider effects of dependence among variables of high-dimensional data in multiple hypothesis testing problems, in particular the False Discovery Rate (FDR) contro...
Kyung In Kim, Mark A. van de Wiel
RECOMB
2005
Springer
16 years 1 days ago
Using Multiple Alignments to Improve Gene Prediction
The multiple species de novo gene prediction problem can be stated as follows: given an alignment of genomic sequences from two or more organisms, predict the location and structur...
Samuel S. Gross, Michael R. Brent
WABI
2005
Springer
15 years 5 months ago
Time-Window Analysis of Developmental Gene Expression Data with Multiple Genetic Backgrounds
d Abstract] Tamir Tuller , Efrat Oron , Erez Makavy , Daniel A. Chamovitz † , and Benny Chor ‡ Tel-Aviv University, Tel-Aviv 69978, Israel. Abstract. We study gene expression d...
Tamir Tuller, Efrat Oron, Erez Makavy, Daniel A. C...
101
Voted
BMCBI
2010
132views more  BMCBI 2010»
14 years 12 months ago
Parallel multiplicity and error discovery rate (EDR) in microarray experiments
Background: In microarray gene expression profiling experiments, differentially expressed genes (DEGs) are detected from among tens of thousands of genes on an array using statist...
Wayne Wenzhong Xu, Clay J. Carter