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» On the Multiple Gene Duplication Problem
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BMCBI
2004
252views more  BMCBI 2004»
14 years 11 months ago
Applying Support Vector Machines for Gene ontology based gene function prediction
Background: The current progress in sequencing projects calls for rapid, reliable and accurate function assignments of gene products. A variety of methods has been designed to ann...
Arunachalam Vinayagam, Rainer König, Jutta Mo...
BMCBI
2006
95views more  BMCBI 2006»
14 years 11 months ago
XcisClique: analysis of regulatory bicliques
Background: Modeling of cis-elements or regulatory motifs in promoter (upstream) regions of genes is a challenging computational problem. In this work, set of regulatory motifs si...
Amrita Pati, Cecilia Vasquez-Robinet, Lenwood S. H...
KDD
2004
ACM
195views Data Mining» more  KDD 2004»
16 years 4 days ago
Improved robustness of signature-based near-replica detection via lexicon randomization
Detection of near duplicate documents is an important problem in many data mining and information filtering applications. When faced with massive quantities of data, traditional d...
Aleksander Kolcz, Abdur Chowdhury, Joshua Alspecto...
108
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IJCAI
2003
15 years 1 months ago
Employing Trainable String Similarity Metrics for Information Integration
The problem of identifying approximately duplicate objects in databases is an essential step for the information integration process. Most existing approaches have relied on gener...
Mikhail Bilenko, Raymond J. Mooney
WABI
2001
Springer
138views Bioinformatics» more  WABI 2001»
15 years 4 months ago
Algorithms for Finding Gene Clusters
Abstract. Comparing gene orders in completely sequenced genomes is a standard approach to locate clusters of functionally associated genes. Often, gene orders are modeled as permut...
Steffen Heber, Jens Stoye