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» On the Multiple Gene Duplication Problem
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91
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BMCBI
2007
109views more  BMCBI 2007»
14 years 11 months ago
Discarding duplicate ditags in LongSAGE analysis may introduce significant error
Background: During gene expression analysis by Serial Analysis of Gene Expression (SAGE), duplicate ditags are routinely removed from the data analysis, because they are suspected...
Jeppe Emmersen, Anna M. Heidenblut, Annabeth Laurs...
92
Voted
BMCBI
2006
102views more  BMCBI 2006»
14 years 11 months ago
UVPAR: fast detection of functional shifts in duplicate genes
Background: The imprint of natural selection on gene sequences is often difficult to detect. A plethora of methods have been devised to detect genetic changes due to selective pro...
Vicente Arnau, Miguel Gallach, J. Ignasi Lucas, Ig...
RECOMB
2002
Springer
15 years 12 months ago
Tests for gene clustering
Comparing chromosomal gene order in two or more related species is an important approach to studying the forces that guide genome organization and evolution. Linked clusters of si...
Dannie Durand, David Sankoff
95
Voted
ICDE
2005
IEEE
108views Database» more  ICDE 2005»
15 years 5 months ago
Robust Identification of Fuzzy Duplicates
Detecting and eliminating fuzzy duplicates is a critical data cleaning task that is required by many applications. Fuzzy duplicates are multiple seemingly distinct tuples which re...
Surajit Chaudhuri, Venkatesh Ganti, Rajeev Motwani
BMCBI
2010
133views more  BMCBI 2010»
14 years 11 months ago
Translog, a web browser for studying the expression divergence of homologous genes
Background: Increasing amount of data from comparative genomics, and newly developed technologies producing accurate gene expression data facilitate the study of the expression di...
Xianjun Dong, Altuna Akalin, Yogita Sharma, Boris ...