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» On the Multiple Gene Duplication Problem
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BMCBI
2006
156views more  BMCBI 2006»
14 years 11 months ago
Score-based prediction of genomic islands in prokaryotic genomes using hidden Markov models
Background: Horizontal gene transfer (HGT) is considered a strong evolutionary force shaping the content of microbial genomes in a substantial manner. It is the difference in spee...
Stephan Waack, Oliver Keller, Roman Asper, Thomas ...
EDBT
2009
ACM
145views Database» more  EDBT 2009»
15 years 3 months ago
Efficient top-k count queries over imprecise duplicates
We propose efficient techniques for processing various TopK count queries on data with noisy duplicates. Our method differs from existing work on duplicate elimination in two sign...
Sunita Sarawagi, Vinay S. Deshpande, Sourabh Kasli...
WWW
2008
ACM
16 years 11 days ago
Efficient similarity joins for near duplicate detection
With the increasing amount of data and the need to integrate data from multiple data sources, a challenging issue is to find near duplicate records efficiently. In this paper, we ...
Chuan Xiao, Wei Wang 0011, Xuemin Lin, Jeffrey Xu ...
BMCBI
2010
135views more  BMCBI 2010»
14 years 11 months ago
Efficient genome-scale phylogenetic analysis under the duplication-loss and deep coalescence cost models
Background: Genomic data provide a wealth of new information for phylogenetic analysis. Yet making use of this data requires phylogenetic methods that can efficiently analyze extr...
Mukul S. Bansal, J. Gordon Burleigh, Oliver Eulens...
PVLDB
2008
99views more  PVLDB 2008»
14 years 11 months ago
Industry-scale duplicate detection
Duplicate detection is the process of identifying multiple representations of a same real-world object in a data source. Duplicate detection is a problem of critical importance in...
Melanie Weis, Felix Naumann, Ulrich Jehle, Jens Lu...