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» On the Power of Computing with Proteins on Membranes
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BMCBI
2006
143views more  BMCBI 2006»
14 years 11 months ago
Fast estimation of the difference between two PAM/JTT evolutionary distances in triplets of homologous sequences
Background: The estimation of the difference between two evolutionary distances within a triplet of homologs is a common operation that is used for example to determine which of t...
Christophe Dessimoz, Manuel Gil, Adrian Schneider,...
NAR
2011
290views Computer Vision» more  NAR 2011»
14 years 2 months ago
AHD2.0: an update version of Arabidopsis Hormone Database for plant systematic studies
Phytohormone studies enlightened our knowledge of plant responses to various changes. To provide a systematic and comprehensive view of genes participating in plant hormonal regul...
Zhiqiang Jiang, Xiao-Chuan Liu, Zhiyu Peng, Yinan ...
ACML
2009
Springer
15 years 6 months ago
Community Detection on Weighted Networks: A Variational Bayesian Method
Abstract. Massive real-world data are network-structured, such as social network, relationship between proteins and power grid. Discovering the latent communities is a useful way f...
Qixia Jiang, Yan Zhang, Maosong Sun
ECCB
2003
IEEE
15 years 5 months ago
Gene networks inference using dynamic Bayesian networks
This article deals with the identification of gene regulatory networks from experimental data using a statistical machine learning approach. A stochastic model of gene interactio...
Bruno-Edouard Perrin, Liva Ralaivola, Aurél...
BMCBI
2005
130views more  BMCBI 2005»
14 years 11 months ago
Squid - a simple bioinformatics grid
Background: BLAST is a widely used genetic research tool for analysis of similarity between nucleotide and protein sequences. This paper presents a software application entitled &...
Paulo C. Carvalho, Rafael V. Glória, Antoni...