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» On the Value of Correlation
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BMCBI
2006
128views more  BMCBI 2006»
14 years 9 months ago
Comparative assessment of performance and genome dependence among phylogenetic profiling methods
Background: The rapidly increasing speed with which genome sequence data can be generated will be accompanied by an exponential increase in the number of sequenced eukaryotes. Wit...
Evan S. Snitkin, Adam M. Gustafson, Joseph C. Mell...
DATAMINE
2006
224views more  DATAMINE 2006»
14 years 9 months ago
Characteristic-Based Clustering for Time Series Data
With the growing importance of time series clustering research, particularly for similarity searches amongst long time series such as those arising in medicine or finance, it is cr...
Xiaozhe Wang, Kate A. Smith, Rob J. Hyndman
BMCBI
2007
102views more  BMCBI 2007»
14 years 9 months ago
qPIPSA: Relating enzymatic kinetic parameters and interaction fields
Background: The simulation of metabolic networks in quantitative systems biology requires the assignment of enzymatic kinetic parameters. Experimentally determined values are ofte...
Razif R. Gabdoulline, Matthias Stein, Rebecca C. W...
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BMCBI
2007
107views more  BMCBI 2007»
14 years 9 months ago
A computational approach for detecting peptidases and their specific inhibitors at the genome level
Background: Peptidases are proteolytic enzymes responsible for fundamental cellular activities in all organisms. Apparently about 2–5% of the genes encode for peptidases, irresp...
Lisa Bartoli, Remo Calabrese, Piero Fariselli, Dam...
BMCBI
2005
142views more  BMCBI 2005»
14 years 9 months ago
High performance workflow implementation for protein surface characterization using grid technology
Background: This study concerns the development of a high performance workflow that, using grid technology, correlates different kinds of Bioinformatics data, starting from the ba...
Ivan Merelli, Giulia Morra, Daniele D'Agostino, An...