Prokaryotic organisms share genetic material across species boundaries by means of a process known as horizontal gene transfer (HGT). Detecting this process bears great significanc...
Cuong Than, Derek A. Ruths, Hideki Innan, Luay Nak...
We study the problem of enumerating substrings that are common amongst genomes that share evolutionary descent. For example, one might want to enumerate all identical (therefore co...
Stanislav Angelov, Boulos Harb, Sampath Kannan, Sa...
Abstract. In order to guarantee that the optimal motif is found, traditional pattern-driven approaches perform an exhaustive search over all candidate motifs of length l. We develo...
Our general goal is to provide better automation in interactive proof assistants such as Coq. We present an interpreter of proof traces in first-order multi-sorted logic with equal...
The central goal of data stream algorithms is to process massive streams of data using sublinear storage space. Motivated by work in the database community on outsourcing database...