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BMCBI
2011
14 years 4 months ago
Statistical Test of Expression Pattern (STEPath): a new strategy to integrate gene expression data with genomic information in i
Background: In the last decades, microarray technology has spread, leading to a dramatic increase of publicly available datasets. The first statistical tools developed were focuse...
Paolo G. V. Martini, Davide Risso, Gabriele Sales,...
SIAMNUM
2011
144views more  SIAMNUM 2011»
14 years 4 months ago
Continuous Mesh Framework Part II: Validations and Applications
This paper gives a numerical validation of the continuous mesh framework introduced in Part I [23]. We numerically show that the interpolation error can be evaluated analytically o...
Adrien Loseille, Frédéric Alauzet
BIOINFORMATICS
2011
14 years 4 months ago
All-atom knowledge-based potential for RNA structure prediction and assessment
Motivation: Over the recent years, the vision that RNA simply serves as information transfer molecule has dramatically changed. The study of the sequence/structure/function relati...
Emidio Capriotti, Tomás Norambuena, Marc A....
SIAMCOMP
2002
138views more  SIAMCOMP 2002»
14 years 9 months ago
Phase Change of Limit Laws in the Quicksort Recurrence under Varying Toll Functions
We characterize all limit laws of the quicksort type random variables defined recursively by Xn d = XIn + X n-1-In + Tn when the "toll function" Tn varies and satisfies ...
Hsien-Kuei Hwang, Ralph Neininger
BMCBI
2010
112views more  BMCBI 2010»
14 years 10 months ago
Computational identification of rare codons of Escherichia coli based on codon pairs preference
Background: Codon bias is believed to play an important role in the control of gene expression. In Escherichia coli, some rare codons, which can limit the expression level of exog...
Xianming Wu, Songfeng Wu, Dong Li, Jiyang Zhang, L...