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» On the correlation of binary sequences
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NAR
2006
107views more  NAR 2006»
14 years 9 months ago
CorGen - measuring and generating long-range correlations for DNA sequence analysis
CorGen is a web server that measures long-range correlations in the base composition of DNA and generates random sequences with the same correlation parameters. Long-range correla...
Philipp W. Messer, Peter F. Arndt
BMCBI
2011
14 years 1 months ago
In-silico prediction of disorder content using hybrid sequence representation
Background: Intrinsically disordered proteins play important roles in various cellular activities and their prevalence was implicated in a number of human diseases. The knowledge ...
Marcin J. Mizianty, Tuo Zhang, Bin Xue, Yaoqi Zhou...
PVLDB
2008
82views more  PVLDB 2008»
14 years 9 months ago
Mining non-redundant high order correlations in binary data
Many approaches have been proposed to find correlations in binary data. Usually, these methods focus on pair-wise correlations. In biology applications, it is important to find co...
Xiang Zhang, Feng Pan, Wei Wang 0010, Andrew B. No...
TCOM
2011
86views more  TCOM 2011»
14 years 4 months ago
New Bounds and Optimal Binary Signature Sets - Part I: Periodic Total Squared Correlation
—We derive new bounds on the periodic (cyclic) total squared correlation (PTSC) of binary antipodal signature sets for any number of signatures K and any signature length L. Opti...
Harish Ganapathy, Dimitrios A. Pados, George N. Ka...
ICC
2007
IEEE
15 years 4 months ago
New Bounds on the Aperiodic Total Squared Correlation of Binary Signature Sets and Optimal Designs
— We derive new bounds on the aperiodic total squared correlation (ATSC) of binary antipodal signature sets for any number of signatures K and any signature length L. We then pre...
Harish Ganapathy, Dimitrios A. Pados, George N. Ka...