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» On the editing distance of graphs
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JCB
2002
111views more  JCB 2002»
14 years 11 months ago
A General Edit Distance between RNA Structures
Arc-annotated sequences are useful in representing the structural information of RNA sequences. In general, RNA secondary and tertiary structures can be represented as a set of ne...
Tao Jiang, Guohui Lin, Bin Ma, Kaizhong Zhang
ESA
1998
Springer
175views Algorithms» more  ESA 1998»
15 years 3 months ago
Computing the Edit-Distance between Unrooted Ordered Trees
An ordered tree is a tree in which each node's incident edges are cyclically ordered; think of the tree as being embedded in the plane. Let A and B be two ordered trees. The e...
Philip N. Klein
STOC
2009
ACM
182views Algorithms» more  STOC 2009»
16 years 8 days ago
Approximating edit distance in near-linear time
We show how to compute the edit distance between two strings of length n up to a factor of 2 ~O( log n) in n1+o(1) time. This is the first sub-polynomial approximation algorithm f...
Alexandr Andoni, Krzysztof Onak
FOCS
2004
IEEE
15 years 3 months ago
Approximating Edit Distance Efficiently
Edit distance has been extensively studied for the past several years. Nevertheless, no linear-time algorithm is known to compute the edit distance between two strings, or even to...
Ziv Bar-Yossef, T. S. Jayram, Robert Krauthgamer, ...
SPIRE
2005
Springer
15 years 5 months ago
Restricted Transposition Invariant Approximate String Matching Under Edit Distance
Let A and B be strings with lengths m and n, respectively, over a finite integer alphabet. Two classic string mathing problems are computing the edit distance between A and B, and...
Heikki Hyyrö