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BMCBI
2010
183views more  BMCBI 2010»
14 years 12 months ago
SOPRA: Scaffolding algorithm for paired reads via statistical optimization
Background: High throughput sequencing (HTS) platforms produce gigabases of short read (<100 bp) data per run. While these short reads are adequate for resequencing application...
Adel Dayarian, Todd P. Michael, Anirvan M. Sengupt...
BMCBI
2007
265views more  BMCBI 2007»
14 years 12 months ago
Large scale clustering of protein sequences with FORCE -A layout based heuristic for weighted cluster editing
Background: Detecting groups of functionally related proteins from their amino acid sequence alone has been a long-standing challenge in computational genome research. Several clu...
Tobias Wittkop, Jan Baumbach, Francisco P. Lobo, S...
CN
2008
98views more  CN 2008»
14 years 12 months ago
Description and simulation of dynamic mobility networks
During the last decade, the study of large scale complex networks has attracted a substantial amount of attention and works from several domains: sociology, biology, computer scie...
Antoine Scherrer, Pierre Borgnat, Eric Fleury, Jea...
SIGMETRICS
2008
ACM
181views Hardware» more  SIGMETRICS 2008»
14 years 11 months ago
Counter braids: a novel counter architecture for per-flow measurement
Fine-grained network measurement requires routers and switches to update large arrays of counters at very high link speed (e.g. 40 Gbps). A naive algorithm needs an infeasible amo...
Yi Lu, Andrea Montanari, Balaji Prabhakar, Sarang ...
JSAC
2011
116views more  JSAC 2011»
14 years 6 months ago
Low Complexity Outage Optimal Distributed Channel Allocation for Vehicle-to-Vehicle Communications
—Due to the potential of enhancing traffic safety, protecting environment, and enabling new applications, vehicular communications, especially vehicle-to-vehicle (V2V) communica...
Bo Bai, Wei Chen, Khaled Ben Letaief, Zhigang Cao