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» On the maximum quartet distance between phylogenetic trees
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VIROLOGY
2008
104views more  VIROLOGY 2008»
14 years 9 months ago
Malware behaviour analysis
Several malware analysis techniques suppose that the disassembled code of a piece of malware is available, which is however not always possible. This paper proposes a flexible and ...
Gérard Wagener, Radu State, Alexandre Dulau...
IJCV
2007
115views more  IJCV 2007»
14 years 9 months ago
Discovering Shape Classes using Tree Edit-Distance and Pairwise Clustering
This paper describes work aimed at the unsupervised learning of shape-classes from shock trees. We commence by considering how to compute the edit distance between weighted trees. ...
Andrea Torsello, Antonio Robles-Kelly, Edwin R. Ha...
75
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CPM
2000
Springer
136views Combinatorics» more  CPM 2000»
15 years 1 months ago
Approximating the Maximum Isomorphic Agreement Subtree Is Hard
The Maximum Isomorphic Agreement Subtree (MIT) problem is one of the simplest versions of the Maximum Interval Weight Agreement Subtree method (MIWT) which is used to compare phyl...
Paola Bonizzoni, Gianluca Della Vedova, Giancarlo ...
BMCBI
2007
138views more  BMCBI 2007»
14 years 9 months ago
Fast computation of distance estimators
Background: Some distance methods are among the most commonly used methods for reconstructing phylogenetic trees from sequence data. The input to a distance method is a distance m...
Isaac Elias, Jens Lagergren
BMCBI
2008
130views more  BMCBI 2008»
14 years 9 months ago
A database of phylogenetically atypical genes in archaeal and bacterial genomes, identified using the DarkHorse algorithm
Background: The process of horizontal gene transfer (HGT) is believed to be widespread in Bacteria and Archaea, but little comparative data is available addressing its occurrence ...
Sheila Podell, Terry Gaasterland, Eric E. Allen