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BMCBI
2007
128views more  BMCBI 2007»
14 years 10 months ago
A Bayesian nonparametric method for prediction in EST analysis
Background: Expressed sequence tags (ESTs) analyses are a fundamental tool for gene identification in organisms. Given a preliminary EST sample from a certain library, several sta...
Antonio Lijoi, Ramsés H. Mena, Igor Prü...
67
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BMCBI
2008
120views more  BMCBI 2008»
14 years 10 months ago
E-CAI: a novel server to estimate an expected value of Codon Adaptation Index (eCAI)
Background: The Codon Adaptation Index (CAI) is a measure of the synonymous codon usage bias for a DNA or RNA sequence. It quantifies the similarity between the synonymous codon u...
Pere Puigbò, Ignacio G. Bravo, Santiago Gar...
BMCBI
2006
109views more  BMCBI 2006»
14 years 10 months ago
A computational approach to discovering the functions of bacterial phytochromes by analysis of homolog distributions
Background: Phytochromes are photoreceptors, discovered in plants, that control a wide variety of developmental processes. They have also been found in bacteria and fungi, but for...
Tilman Lamparter
JCB
2008
52views more  JCB 2008»
14 years 10 months ago
Spectrum-Based De Novo Repeat Detection in Genomic Sequences
A novel approach to the detection of genomic repeats is presented in this paper. The technique, dubbed SAGRI (Spectrum Assisted Genomic Repeat Identifier), is based on the spectru...
Huy Hoang Do, Kwok Pui Choi, Franco P. Preparata, ...
144
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JMLR
2006
389views more  JMLR 2006»
14 years 10 months ago
A Very Fast Learning Method for Neural Networks Based on Sensitivity Analysis
This paper introduces a learning method for two-layer feedforward neural networks based on sensitivity analysis, which uses a linear training algorithm for each of the two layers....
Enrique Castillo, Bertha Guijarro-Berdiñas,...