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SIAMIS
2008
174views more  SIAMIS 2008»
14 years 11 months ago
Efficient Reconstruction of Piecewise Constant Images Using Nonsmooth Nonconvex Minimization
We consider the restoration of piecewise constant images where the number of the regions and their values are not fixed in advance, with a good difference of piecewise constant val...
Mila Nikolova, Michael K. Ng, Shuqin Zhang, Wai-Ki...
RPTEL
2006
75views more  RPTEL 2006»
14 years 11 months ago
A Qualitative Analysis of Collaborative Knowledge Construction through Shared Representations
This paper takes one step towards addressing the question of how activity mediated by shared representations--notations that are manipulated by more than one person during a collab...
Daniel D. Suthers
BMCBI
2005
142views more  BMCBI 2005»
14 years 11 months ago
transAlign: using amino acids to facilitate the multiple alignment of protein-coding DNA sequences
Background: Alignments of homologous DNA sequences are crucial for comparative genomics and phylogenetic analysis. However, multiple alignment represents a computationally difficu...
Olaf R. P. Bininda-Emonds
BMCBI
2005
198views more  BMCBI 2005»
14 years 11 months ago
Clustering protein sequences with a novel metric transformed from sequence similarity scores and sequence alignments with neural
Background: The sequencing of the human genome has enabled us to access a comprehensive list of genes (both experimental and predicted) for further analysis. While a majority of t...
Qicheng Ma, Gung-Wei Chirn, Richard Cai, Joseph D....
BMCBI
2005
87views more  BMCBI 2005»
14 years 11 months ago
Efficient decoding algorithms for generalized hidden Markov model gene finders
Background: The Generalized Hidden Markov Model (GHMM) has proven a useful framework for the task of computational gene prediction in eukaryotic genomes, due to its flexibility an...
William H. Majoros, Mihaela Pertea, Arthur L. Delc...