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» Ontology mapping using background knowledge
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WEBI
2010
Springer
14 years 9 months ago
A Scalable Indexing Mechanism for Ontology-Based Information Integration
In recent years, there has been an explosion of publicly available RDF and OWL web pages. Some of these pages are static text files, while others are dynamically generated from la...
Yingjie Li, Abir Qasem, Jeff Heflin
112
Voted
BMCBI
2008
141views more  BMCBI 2008»
14 years 11 months ago
The development of PIPA: an integrated and automated pipeline for genome-wide protein function annotation
Background: Automated protein function prediction methods are needed to keep pace with high-throughput sequencing. With the existence of many programs and databases for inferring ...
Chenggang Yu, Nela Zavaljevski, Valmik Desai, Seth...
BMCBI
2007
131views more  BMCBI 2007»
14 years 11 months ago
FUNC: a package for detecting significant associations between gene sets and ontological annotations
Background: Genome-wide expression, sequence and association studies typically yield large sets of gene candidates, which must then be further analysed and interpreted. Informatio...
Kay Prüfer, Bjoern Muetzel, Hong Hai Do, Gunt...
KCAP
2005
ACM
15 years 4 months ago
Matching utterances to rich knowledge structures to acquire a model of the speaker's goal
An ultimate goal of AI is to build end-to-end systems that interpret natural language, reason over the resulting logical forms, and perform actions based on that reasoning. This r...
Peter Z. Yeh, Bruce W. Porter, Ken Barker
BMCBI
2008
122views more  BMCBI 2008»
14 years 11 months ago
OpenDMAP: An open source, ontology-driven concept analysis engine, with applications to capturing knowledge regarding protein tr
Background: Information extraction (IE) efforts are widely acknowledged to be important in harnessing the rapid advance of biomedical knowledge, particularly in areas where import...
Lawrence Hunter, Zhiyong Lu, James Firby, William ...