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BMCBI
2002
137views more  BMCBI 2002»
15 years 5 months ago
ORFer - retrieval of protein sequences and open reading frames from GenBank and storage into relational databases or text files
Background: Functional genomics involves the parallel experimentation with large sets of proteins. This requires management of large sets of open reading frames as a prerequisite ...
Konrad Büssow, Steve Hoffmann, Volker Sievert
NAR
2000
104views more  NAR 2000»
15 years 5 months ago
Transterm: a database of messenger RNA components and signals
Transterm facilitates studies of messenger RNAs and translational control signals. Each messenger RNA (mRNA) from GenBank is extracted and broken into its functional components, i...
Grant H. Jacobs, Peter A. Stockwell, Mark J. Schre...
ICOODB
2010
117views Database» more  ICOODB 2010»
15 years 4 months ago
iBLOB: Complex Object Management in Databases through Intelligent Binary Large Objects
Abstract. New emerging applications including genomic, multimedia, and geospatial technologies have necessitated the handling of complex application objects that are highly structu...
Tao Chen, Arif Khan, Markus Schneider, Ganesh Visw...
DEBU
2010
128views more  DEBU 2010»
15 years 3 months ago
Designing Database Operators for Flash-enabled Memory Hierarchies
Flash memory affects not only storage options but also query processing. In this paper, we analyze the use of flash memory for database query processing, including algorithms that...
Goetz Graefe, Stavros Harizopoulos, Harumi A. Kuno...
NAR
2011
203views Computer Vision» more  NAR 2011»
14 years 9 months ago
Laminin database: a tool to retrieve high-throughput and curated data for studies on laminins
The Laminin(LM)-database, hosted at http://www .lm.lncc.br, is the first database focusing a noncollagenous extracellular matrix protein family, the LMs. Part of the knowledge ava...
Daiane C. F. Golbert, Leandra Linhares-Lacerda, Lu...