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108
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BMCBI
2007
115views more  BMCBI 2007»
15 years 3 months ago
A novel, fast, HMM-with-Duration implementation - for application with a new, pattern recognition informed, nanopore detector
Background: Hidden Markov Models (HMMs) provide an excellent means for structure identification and feature extraction on stochastic sequential data. An HMM-with-Duration (HMMwD) ...
Stephen Winters-Hilt, Carl Baribault
144
Voted
GEOINFORMATICA
2008
123views more  GEOINFORMATICA 2008»
15 years 3 months ago
Efficient Implementation Techniques for Topological Predicates on Complex Spatial Objects
Topological relationships like overlap, inside, meet, and disjoint uniquely characterize the relative position between objects in space. For a long time, they have been a focus of...
Reasey Praing, Markus Schneider
158
Voted
ANCS
2005
ACM
15 years 9 months ago
Segmented hash: an efficient hash table implementation for high performance networking subsystems
Hash tables provide efficient table implementations, achieving O(1), query, insert and delete operations at low loads. However, at moderate or high loads collisions are quite freq...
Sailesh Kumar, Patrick Crowley
132
Voted
BMCBI
2006
114views more  BMCBI 2006»
15 years 3 months ago
A high level interface to SCOP and ASTRAL implemented in Python
Background: Benchmarking algorithms in structural bioinformatics often involves the construction of datasets of proteins with given sequence and structural properties. The SCOP da...
James A. Casbon, Gavin E. Crooks, Mansoor A. S. Sa...
146
Voted
USS
2004
15 years 5 months ago
Tor: The Second-Generation Onion Router
We present Tor, a circuit-based low-latency anonymous communication service. This second-generation Onion Routing system addresses limitations in the original design by adding per...
Roger Dingledine, Nick Mathewson, Paul F. Syverson