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BMCBI
2008
101views more  BMCBI 2008»
15 years 6 months ago
Term-tissue specific models for prediction of gene ontology biological processes using transcriptional profiles of aging in dros
Background: Predictive classification on the base of gene expression profiles appeared recently as an attractive strategy for identifying the biological functions of genes. Gene O...
Wensheng Zhang, Sige Zou, Jiuzhou Song
BMCBI
2008
211views more  BMCBI 2008»
15 years 6 months ago
CUDA compatible GPU cards as efficient hardware accelerators for Smith-Waterman sequence alignment
Background: Searching for similarities in protein and DNA databases has become a routine procedure in Molecular Biology. The Smith-Waterman algorithm has been available for more t...
Svetlin Manavski, Giorgio Valle
BMCBI
2006
165views more  BMCBI 2006»
15 years 6 months ago
Improving the quality of protein structure models by selecting from alignment alternatives
Background: In the area of protein structure prediction, recently a lot of effort has gone into the development of Model Quality Assessment Programs (MQAPs). MQAPs distinguish hig...
Ingolf Sommer, Stefano Toppo, Oliver Sander, Thoma...
ECCC
2006
134views more  ECCC 2006»
15 years 6 months ago
Derandomizing the AW matrix-valued Chernoff bound using pessimistic estimators and applications
Ahlswede and Winter [AW02] introduced a Chernoff bound for matrix-valued random variables, which is a non-trivial generalization of the usual Chernoff bound for real-valued random...
Avi Wigderson, David Xiao
COR
2007
81views more  COR 2007»
15 years 6 months ago
Job scheduling methods for reducing waiting time variance
Minimizing Waiting Time Variance (WTV) is a job scheduling problem where we schedule a batch of n jobs, for servicing on a single resource, in such a way that the variance of thei...
Nong Ye, Xueping Li, Toni Farley, Xiaoyun Xu
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