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BIOCOMP
2007
15 years 1 months ago
Quality-Based Similarity Search for Biological Sequence Databases
Low-Complexity Regions (LCRs) of biological sequences are the main source of false positives in similarity searches for biological sequence databases. We consider the problem of ï...
Xuehui Li, Tamer Kahveci
PSB
2003
15 years 1 months ago
MAP: Searching Large Genome Databases
A number of biological applications require comparison of large genome strings. Current techniques suffer from both disk I/O and computational cost because of extensive memory req...
Tamer Kahveci, Ambuj K. Singh
EOR
2006
128views more  EOR 2006»
14 years 11 months ago
Scatter search for project scheduling with resource availability cost
This paper considers a project scheduling problem with the objective of minimizing resource availability costs, taking into account a deadline for the project and precedence relat...
Denise Sato Yamashita, Vinícius Amaral Arme...
GECCO
2007
Springer
256views Optimization» more  GECCO 2007»
15 years 6 months ago
A particle swarm optimization approach for estimating parameter confidence regions
Point estimates of the parameters in real world models convey valuable information about the actual system. However, parameter comparisons and/or statistical inference requires de...
Praveen Koduru, Stephen Welch, Sanjoy Das
GECCO
2003
Springer
15 years 5 months ago
Quad Search and Hybrid Genetic Algorithms
A bit climber using a Gray encoding is guaranteed to converge to a global optimum in fewer than ¢¤£¦¥¨§© evaluations on unimodal 1-D functions and on multi-dimensional sph...
L. Darrell Whitley, Deon Garrett, Jean-Paul Watson