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BMCBI
2008
166views more  BMCBI 2008»
14 years 9 months ago
Biclustering via optimal re-ordering of data matrices in systems biology: rigorous methods and comparative studies
Background: The analysis of large-scale data sets via clustering techniques is utilized in a number of applications. Biclustering in particular has emerged as an important problem...
Peter A. DiMaggio Jr., Scott R. McAllister, Christ...
CCGRID
2003
IEEE
15 years 2 months ago
CARDs: Cluster-Aware Remote Disks
This paper presents Cluster-Aware Remote Disks (CARDs), a Single System I/O architecture for cluster computing. CARDs virtualize accesses to remote cluster disks over a System Are...
Vlad Olaru, Walter F. Tichy
BMCBI
2004
151views more  BMCBI 2004»
14 years 9 months ago
Design, implementation and evaluation of a practical pseudoknot folding algorithm based on thermodynamics
Background: The general problem of RNA secondary structure prediction under the widely used thermodynamic model is known to be NP-complete when the structures considered include a...
Jens Reeder, Robert Giegerich
72
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GECCO
2004
Springer
15 years 2 months ago
Towards a Generally Applicable Self-Adapting Hybridization of Evolutionary Algorithms
When applied to real-world problems, the powerful optimization tool of Evolutionary Algorithms frequently turns out to be too time-consuming due to elaborate fitness calculations t...
Wilfried Jakob, Christian Blume, Georg Bretthauer
COCOON
2010
Springer
15 years 2 months ago
Clustering with or without the Approximation
We study algorithms for clustering data that were recently proposed by Balcan, Blum and Gupta in SODA’09 [4] and that have already given rise to two follow-up papers. The input f...
Frans Schalekamp, Michael Yu, Anke van Zuylen