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» Optimal phylogenetic reconstruction
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NIPS
2008
14 years 11 months ago
Efficient Inference in Phylogenetic InDel Trees
Accurate and efficient inference in evolutionary trees is a central problem in computational biology. While classical treatments have made unrealistic site independence assumption...
Alexandre Bouchard-Côté, Michael I. J...
RECOMB
2009
Springer
15 years 4 months ago
Phylogenies without Branch Bounds: Contracting the Short, Pruning the Deep
Abstract Constantinos Daskalakis1 , Elchanan Mossel2, , and Sebastien Roch1 1 Microsoft Research 2 UC Berkeley and Weizman Institute We introduce a new phylogenetic reconstruction ...
Constantinos Daskalakis, Elchanan Mossel, Sé...
TCS
2011
14 years 4 months ago
The transposition median problem is NP-complete
During the last years, the genomes of more and more species have been sequenced, providing data for phylogenetic reconstruction based on genome rearrangement measures, where the m...
Martin Bader