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ISB
2002
140views more  ISB 2002»
15 years 1 months ago
Computer system "Gene Discovery" for promoter structure analysis
Data Mining and Knowledge Discovery techniques proved to be efficient tools for variety of complex tasks in biology including DNA research. This paper presents implementation of th...
Eugenii E. Vityaev, Yuri L. Orlov, Oleg V. Vishnev...
160
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BMCBI
2002
109views more  BMCBI 2002»
15 years 1 months ago
Kangaroo - A pattern-matching program for biological sequences
Background: Biologists are often interested in performing a simple database search to identify proteins or genes that contain a well-defined sequence pattern. Many databases do no...
Doron Betel, Christopher W. V. Hogue
CADE
2007
Springer
16 years 2 months ago
An Incremental Technique for Automata-Based Decision Procedures
Abstract. Automata-based decision procedures commonly achieve optimal complexity bounds. However, in practice, they are often outperformed by sub-optimal (but more local-search bas...
David Toman, Gulay Ünel
BMCBI
2006
120views more  BMCBI 2006»
15 years 1 months ago
Projections for fast protein structure retrieval
Background: In recent times, there has been an exponential rise in the number of protein structures in databases e.g. PDB. So, design of fast algorithms capable of querying such d...
Sourangshu Bhattacharya, Chiranjib Bhattacharyya, ...
SIGMOD
2008
ACM
125views Database» more  SIGMOD 2008»
16 years 1 months ago
Categorical skylines for streaming data
The problem of skyline computation has attracted considerable research attention. In the categorical domain the problem becomes more complicated, primarily due to the partially-or...
Nikos Sarkas, Gautam Das, Nick Koudas, Anthony K. ...