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» Optimizing Feature Sets for Structured Data
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PODS
2009
ACM
130views Database» more  PODS 2009»
15 years 10 months ago
Secondary indexing in one dimension: beyond b-trees and bitmap indexes
Let be a finite, ordered alphabet, and consider a string x = x1x2 . . . xn n . A secondary index for x answers alphabet range queries of the form: Given a range [al, ar] , retu...
Rasmus Pagh, Srinivasa Rao Satti
BMCBI
2010
106views more  BMCBI 2010»
14 years 10 months ago
Multiple structure alignment and consensus identification for proteins
Background: An algorithm is presented to compute a multiple structure alignment for a set of proteins and to generate a consensus (pseudo) protein which captures common substructu...
Ivaylo Ilinkin, Jieping Ye, Ravi Janardan
WWW
2010
ACM
15 years 4 months ago
Inferring relevant social networks from interpersonal communication
Researchers increasingly use electronic communication data to construct and study large social networks, effectively inferring unobserved ties (e.g. i is connected to j) from obs...
Munmun De Choudhury, Winter A. Mason, Jake M. Hofm...
SIGMOD
2005
ACM
166views Database» more  SIGMOD 2005»
15 years 10 months ago
Substructure Similarity Search in Graph Databases
Advanced database systems face a great challenge raised by the emergence of massive, complex structural data in bioinformatics, chem-informatics, and many other applications. The ...
Xifeng Yan, Philip S. Yu, Jiawei Han
CIKM
2005
Springer
15 years 3 months ago
Optimizing cursor movement in holistic twig joins
Holistic twig join algorithms represent the state of the art for evaluating path expressions in XML queries. Using inverted indexes on XML elements, holistic twig joins move a set...
Marcus Fontoura, Vanja Josifovski, Eugene J. Sheki...