Let be a finite, ordered alphabet, and consider a string x = x1x2 . . . xn n . A secondary index for x answers alphabet range queries of the form: Given a range [al, ar] , retu...
Background: An algorithm is presented to compute a multiple structure alignment for a set of proteins and to generate a consensus (pseudo) protein which captures common substructu...
Researchers increasingly use electronic communication data to construct and study large social networks, effectively inferring unobserved ties (e.g. i is connected to j) from obs...
Munmun De Choudhury, Winter A. Mason, Jake M. Hofm...
Advanced database systems face a great challenge raised by the emergence of massive, complex structural data in bioinformatics, chem-informatics, and many other applications. The ...
Holistic twig join algorithms represent the state of the art for evaluating path expressions in XML queries. Using inverted indexes on XML elements, holistic twig joins move a set...
Marcus Fontoura, Vanja Josifovski, Eugene J. Sheki...