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BMCBI
2010
164views more  BMCBI 2010»
15 years 3 months ago
Flexible network reconstruction from relational databases with Cytoscape and CytoSQL
Background: Molecular interaction networks can be efficiently studied using network visualization software such as Cytoscape. The relevant nodes, edges and their attributes can be...
Kris Laukens, Jens Hollunder, Thanh Hai Dang, Geer...
106
Voted
BMCBI
2008
120views more  BMCBI 2008»
15 years 3 months ago
E-CAI: a novel server to estimate an expected value of Codon Adaptation Index (eCAI)
Background: The Codon Adaptation Index (CAI) is a measure of the synonymous codon usage bias for a DNA or RNA sequence. It quantifies the similarity between the synonymous codon u...
Pere Puigbò, Ignacio G. Bravo, Santiago Gar...
159
Voted
BMCBI
2007
176views more  BMCBI 2007»
15 years 3 months ago
The Firegoose: two-way integration of diverse data from different bioinformatics web resources with desktop applications
Background: Information resources on the World Wide Web play an indispensable role in modern biology. But integrating data from multiple sources is often encumbered by the need to...
J. Christopher Bare, Paul T. Shannon, Amy K. Schmi...
136
Voted
BMCBI
2004
139views more  BMCBI 2004»
15 years 3 months ago
mlstdbNet - distributed multi-locus sequence typing (MLST) databases
Background: Multi-locus sequence typing (MLST) is a method of typing that facilitates the discrimination of microbial isolates by comparing the sequences of housekeeping gene frag...
Keith A. Jolley, Man-Suen Chan, Martin C. J. Maide...
140
Voted
FOCS
2004
IEEE
15 years 7 months ago
An Optimal Randomised Cell Probe Lower Bound for Approximate Nearest Neighbour Searching
We consider the approximate nearest neighbour search problem on the Hamming cube {0, 1}d. We show that a randomised cell probe algorithm that uses polynomial storage and word size...
Amit Chakrabarti, Oded Regev