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BMCBI
2002
129views more  BMCBI 2002»
14 years 9 months ago
SeqHound: biological sequence and structure database as a platform for bioinformatics research
Background: SeqHound has been developed as an integrated biological sequence, taxonomy, annotation and 3-D structure database system. It provides a high-performance server platfor...
Katerina Michalickova, Gary D. Bader, Michel Dumon...
ICS
2005
Tsinghua U.
15 years 3 months ago
Continuous Replica Placement schemes in distributed systems
The Replica Placement Problem (RPP) aims at creating a set of duplicated data objects across the nodes of a distributed system in order to optimize certain criteria. Typically, RP...
Thanasis Loukopoulos, Petros Lampsas, Ishfaq Ahmad
ICCS
2001
Springer
15 years 2 months ago
High-Performance Algorithm Engineering for Computational Phylogenetics
Abstract. Phylogeny reconstruction from molecular data poses complex optimization problems: almost all optimization models are NP-hard and thus computationally intractable. Yet app...
Bernard M. E. Moret, David A. Bader, Tandy Warnow
PAMI
2011
14 years 5 months ago
Multiview Stereo and Silhouette Consistency via Convex Functionals over Convex Domains
—We propose a convex formulation for silhouette and stereo fusion in 3D reconstruction from multiple images. The key idea is to show that the reconstruction problem can be cast a...
Daniel Cremers, Kalin Kolev
RECOMB
2005
Springer
15 years 10 months ago
Segmentation Conditional Random Fields (SCRFs): A New Approach for Protein Fold Recognition
Abstract. Protein fold recognition is an important step towards understanding protein three-dimensional structures and their functions. A conditional graphical model, i.e. segmenta...
Yan Liu, Jaime G. Carbonell, Peter Weigele, Vanath...