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BMCBI
2011
14 years 1 months ago
Acorn: A grid computing system for constraint based modeling and visualization of the genome scale metabolic reaction networks v
Background: Constraint-based approaches facilitate the prediction of cellular metabolic capabilities, based, in turn on predictions of the repertoire of enzymes encoded in the gen...
Jacek Sroka, Lukasz Bieniasz-Krzywiec, Szymon Gwoz...
GEOS
2007
Springer
15 years 3 months ago
Algorithm, Implementation and Application of the SIM-DL Similarity Server
Abstract. Semantic similarity measurement gained attention as a methodology for ontology-based information retrieval within GIScience over the last years. Several theories explain ...
Krzysztof Janowicz, Carsten Keßler, Mirco Sc...
NAR
2007
90views more  NAR 2007»
14 years 9 months ago
The SUPERFAMILY database in 2007: families and functions
The SUPERFAMILY database provides protein domain assignments, at the SCOP ‘superfamily’ level, for the predicted protein sequences in over 400 completed genomes. A superfamily...
Derek Wilson, Martin Madera, Christine Vogel, Cyru...
WWW
2005
ACM
15 years 10 months ago
Analyzing online discussion for marketing intelligence
We present a system that gathers and analyzes online discussion as it relates to consumer products. Weblogs and online message boards provide forums that record the voice of the p...
Natalie S. Glance, Matthew Hurst, Kamal Nigam, Mat...
NAR
2008
122views more  NAR 2008»
14 years 9 months ago
SIMAP - structuring the network of protein similarities
Protein sequences are the most important source of evolutionary and functional information for new proteins. In order to facilitate the computationally intensive tasks of sequence...
Thomas Rattei, Patrick Tischler, Roland Arnold, Fr...