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» Ordered Sets in the Calculus of Data Structures
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BMCBI
2011
14 years 1 months ago
Structator: fast index-based search for RNA sequence-structure patterns
Background: The secondary structure of RNA molecules is intimately related to their function and often more conserved than the sequence. Hence, the important task of searching dat...
Fernando Meyer, Stefan Kurtz, Rolf Backofen, Sebas...
JMLR
2012
13 years 6 days ago
On Sparse, Spectral and Other Parameterizations of Binary Probabilistic Models
This paper studies issues relating to the parameterization of probability distributions over binary data sets. Several such parameterizations of models for binary data are known, ...
David Buchman, Mark W. Schmidt, Shakir Mohamed, Da...
ICDE
2006
IEEE
112views Database» more  ICDE 2006»
15 years 11 months ago
XSEED: Accurate and Fast Cardinality Estimation for XPath Queries
We propose XSEED, a synopsis of path queries for cardinality estimation that is accurate, robust, efficient, and adaptive to memory budgets. XSEED starts from a very small kernel,...
Ashraf Aboulnaga, Ihab F. Ilyas, M. Tamer Özs...
ICPR
2004
IEEE
15 years 11 months ago
Signal Discrimination Using a Support Vector Machine for Genetic Syndrome Diagnosis
In this study, a support vector machine (SVM) classifies real world data of cytogenetic signals measured from fluorescence in-situ hybridization (FISH) images in order to diagnose...
Amit David, Boaz Lerner
BMCBI
2008
75views more  BMCBI 2008»
14 years 10 months ago
A three-state prediction of single point mutations on protein stability changes
Background: A basic question of protein structural studies is to which extent mutations affect the stability. This question may be addressed starting from sequence and/or from str...
Emidio Capriotti, Piero Fariselli, Ivan Rossi, Rit...