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BIOINFORMATICS
2010
87views more  BIOINFORMATICS 2010»
15 years 4 months ago
Improving protein secondary structure prediction using a simple k-mer model
Motivation: Existing methods for protein sequence analysis are generally firstorder and inherently assume that each position is independent. We develop a general framework for int...
Martin Madera, Ryan Calmus, Grant Thiltgen, Kevin ...
112
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BIOSYSTEMS
2007
52views more  BIOSYSTEMS 2007»
15 years 4 months ago
The genotypic complexity of evolved fault-tolerant and noise-robust circuits
Noise and component failure is an increasingly difficult problem in modern electronic design. Bioinspired techniques is one approach that is applied in an effort to solve such is...
Morten Hartmann, Pauline C. Haddow, Per Kristian L...
BMCBI
2007
107views more  BMCBI 2007»
15 years 4 months ago
Progressive multiple sequence alignments from triplets
Motivation: The quality of progressive sequence alignments strongly depends on the accuracy of the individual pairwise alignment steps since gaps that are introduced at one step c...
Matthias Kruspe, Peter F. Stadler
BMCBI
2008
119views more  BMCBI 2008»
15 years 4 months ago
On deducing causality in metabolic networks
Background: Metabolic networks present a complex interconnected structure, whose understanding is in general a non-trivial task. Several formal approaches have been developed to s...
Chiara Bodei, Andrea Bracciali, Davide Chiarugi
CCE
2008
15 years 4 months ago
Prediction of secondary structures of proteins using a two-stage method
Protein structure determination and prediction has been a focal research subject in life sciences due to the importance of protein structure in understanding the biological and ch...
Fadime Üney Yüksektepe, Özlem Yilma...
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