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» Overlay Networks - Implementation by Specification
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BMCBI
2004
207views more  BMCBI 2004»
15 years 4 months ago
Computational identification of transcription factor binding sites by functional analysis of sets of genes sharing overrep-resen
Background: Transcriptional regulation is a key mechanism in the functioning of the cell, and is mostly effected through transcription factors binding to specific recognition moti...
Davide Corà, Ferdinando Di Cunto, Paolo Pro...
BMCBI
2004
177views more  BMCBI 2004»
15 years 4 months ago
Gapped alignment of protein sequence motifs through Monte Carlo optimization of a hidden Markov model
Background: Certain protein families are highly conserved across distantly related organisms and belong to large and functionally diverse superfamilies. The patterns of conservati...
Andrew F. Neuwald, Jun S. Liu
ECOI
2010
144views more  ECOI 2010»
15 years 3 months ago
Machine reasoning about anomalous sensor data
We describe a semantic data validation tool that is capable of observing incoming real-time sensor data and performing reasoning against a set of rules specific to the scientific d...
Matt Calder, Robert A. Morris, Francesco Peri
BMCBI
2011
14 years 11 months ago
A lightweight, flow-based toolkit for parallel and distributed bioinformatics pipelines
Background: Bioinformatic analyses typically proceed as chains of data-processing tasks. A pipeline, or ‘workflow’, is a well-defined protocol, with a specific structure defin...
Marcin Cieslik, Cameron Mura
GIS
2004
ACM
16 years 5 months ago
A serverless 3D world
Online multi-participant virtual-world systems have attracted significant interest from the Internet community but are hindered by their inability to efficiently support interacti...
Egemen Tanin, Aaron Harwood, Hanan Samet, Sarana N...