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BIBE
2008
IEEE
142views Bioinformatics» more  BIBE 2008»
15 years 8 months ago
Optimizing performance, cost, and sensitivity in pairwise sequence search on a cluster of PlayStations
— The Smith-Waterman algorithm is a dynamic programming method for determining optimal local alignments between nucleotide or protein sequences. However, it suffers from quadrati...
Ashwin M. Aji, Wu-chun Feng
CCGRID
2008
IEEE
15 years 8 months ago
Advanced RDMA-Based Admission Control for Modern Data-Centers
—Current data-centers employ admission control mechanism to maintain low response time and high throughput under overloaded scenarios. Existing mechanisms use internal (on the ov...
Ping Lai, Sundeep Narravula, Karthikeyan Vaidyanat...
ICS
2007
Tsinghua U.
15 years 7 months ago
Cooperative cache partitioning for chip multiprocessors
This paper presents Cooperative Cache Partitioning (CCP) to allocate cache resources among threads concurrently running on CMPs. Unlike cache partitioning schemes that use a singl...
Jichuan Chang, Gurindar S. Sohi
CLUSTER
2005
IEEE
15 years 7 months ago
Minimizing the Network Overhead of Checkpointing in Cycle-harvesting Cluster Environments
Cycle-harvesting systems such as Condor have been developed to make desktop machines in a local area (which are often similar to clusters in hardware configuration) available as ...
Daniel Nurmi, John Brevik, Richard Wolski
INFOVIS
2005
IEEE
15 years 7 months ago
Visualization of Graphs with Associated Timeseries Data
The most common approach to support analysis of graphs with associated time series data include: overlay of data on graph vertices for one timepoint at a time by manipulating a vi...
Purvi Saraiya, Peter Lee, Chris North