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» PARALLEL-TCOFFEE: A parallel multiple sequence aligner

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ISCAPDCS
2007

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PARALLEL-TCOFFEE: A parallel multiple sequence aligner

14 years 11 months ago

Download aluru-sun.ece.iastate.edu

In this paper we present a parallel implementation of T–Coffee — a widely used multiple sequence alignment package. Our software supports a majority of options provided by the...

Jaroslaw Zola, Xiao Yang, Adrian Rospondek, Sriniv...

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ICPP
1995
IEEE

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Parallel Multiple Sequence Alignment Using Speculative Computation

15 years 1 months ago

Download www.dynamics.unam.edu

Tieng K. Yap, Peter J. Munson, Ophir Frieder, Robe...

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IPPS
2009
IEEE

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Parallel reconstruction of neighbor-joining trees for large multiple sequence alignments using CUDA

15 years 4 months ago

Download www.hicomb.org

Computing large multiple protein sequence alignments using progressive alignment tools such as ClustalW requires several hours on state-of-the-art workstations. ClustalW uses a th...

Yongchao Liu, Bertil Schmidt, Douglas L. Maskell

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BIOCOMP
2006

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Space-Efficient Parallel Algorithms for the Constrained Multiple Sequence Alignment Problem

14 years 11 months ago