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» Parallel Algorithm for Maximum Weight Matching in Trees
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ALGORITHMICA
2008
52views more  ALGORITHMICA 2008»
14 years 9 months ago
From Constrained to Unconstrained Maximum Agreement Subtree in Linear Time
We propose and study the Maximum Constrained Agreement Subtree (MCAST) problem, which is a variant of the classical Maximum Agreement Subtree (MAST) problem. Our problem allows us...
V. Berry, Z. S. Peng, H. F. Ting
75
Voted
IPPS
2006
IEEE
15 years 3 months ago
Parallel implementation of a quartet-based algorithm for phylogenetic analysis
This paper describes a parallel implementation of our recently developed algorithm for phylogenetic analysis on the IBM BlueGene/L cluster [15]. This algorithm constructs evolutio...
Bing Bing Zhou, Daniel Chu, Monther Tarawneh, Ping...
HICSS
2008
IEEE
142views Biometrics» more  HICSS 2008»
14 years 9 months ago
K-Trunk and Efficient Algorithms for Finding a K-Trunk on a Tree Network
Given an edge-weighted tree T, a k-trunk is a subtree Tk with k leaves in T which minimizes the sum of the distances of all vertices in T from Tk plus the weight of Tk. In this pa...
Yamin Li, Shietung Peng, Wanming Chu
88
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PVLDB
2010
136views more  PVLDB 2010»
14 years 8 months ago
SigMatch: Fast and Scalable Multi-Pattern Matching
Multi-pattern matching involves matching a data item against a large database of “signature” patterns. Existing algorithms for multipattern matching do not scale well as the s...
Ramakrishnan Kandhan, Nikhil Teletia, Jignesh M. P...
SPAA
1993
ACM
15 years 1 months ago
Optimal Parallel Construction of Hamiltonian Cycles and Spanning Trees in Random Graphs
We give tight bounds on the parallel complexity of some problems involving random graphs. Speci cally, we show that a Hamiltonian cycle, a breadth rst spanning tree, and a maximal...
Philip D. MacKenzie, Quentin F. Stout