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» Parallel Algorithms for Cellular Models Simulation
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BMCBI
2007
157views more  BMCBI 2007»
15 years 2 months ago
A hybrid multiscale Monte Carlo algorithm (HyMSMC) to cope with disparity in time scales and species populations in intracellula
Background: The fundamental role that intrinsic stochasticity plays in cellular functions has been shown via numerous computational and experimental studies. In the face of such e...
Asawari Samant, Babatunde A. Ogunnaike, Dionisios ...
IPPS
2003
IEEE
15 years 7 months ago
UMR: A Multi-Round Algorithm for Scheduling Divisible Workloads
In this paper we present an algorithm for scheduling parallel applications that consist of a divisible workload. Our algorithm uses multiple rounds to overlap communication and co...
Yang Yang, Henri Casanova
LSSC
2007
Springer
15 years 8 months ago
Parallel Implementation of LQG Balanced Truncation for Large-Scale Systems
Model reduction of large-scale linear time-invariant systems is an ubiquitous task in control and simulation of complex dynamical processes. We discuss how LQG balanced truncation ...
José M. Badía, Peter Benner, Rafael ...
VMV
2004
143views Visualization» more  VMV 2004»
15 years 3 months ago
Illustrating Magnetic Field Lines using a Discrete Particle Model
In this paper we demonstrate how a computational physics approach based on a discrete particle model can be employed for the visualization of magnetic field lines. This can be reg...
Thomas Klein, Thomas Ertl
PADS
2005
ACM
15 years 7 months ago
Seven-O'Clock: A New Distributed GVT Algorithm Using Network Atomic Operations
In this paper we introduce a new concept, network atomic operations (NAOs) to create a zero-cost consistent cut. Using NAOs, we define a wall-clock-time driven GVT algorithm call...
David W. Bauer, Garrett R. Yaun, Christopher D. Ca...