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» Parallel Computation in Biological Sequence Analysis
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ISMB
2000
14 years 11 months ago
Integrative Analysis of Protein Interaction Data
We have developed a method for the integrative analysis of protein interaction data. It comprises clustering, visualization and data integration components. The method is generall...
Matthias Fellenberg, Kaj Albermann, Alfred Zollner...
NAR
2006
129views more  NAR 2006»
14 years 9 months ago
AliWABA: alignment on the web through an A-Bruijn approach
Multiple sequence alignment programs are an invaluable tool in computational biology. A-Bruijn Alignment (ABA) is a method for multiple sequence alignment that represents an align...
Neil C. Jones, Degui Zhi, Benjamin J. Raphael
PLDI
2012
ACM
12 years 12 months ago
Diderot: a parallel DSL for image analysis and visualization
Research scientists and medical professionals use imaging technology, such as computed tomography (CT) and magnetic resonance imaging (MRI) to measure a wide variety of biological...
Charisee Chiw, Gordon Kindlmann, John Reppy, Lamon...
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RECOMB
2000
Springer
15 years 1 months ago
Sequencing-by-hybridization at the information-theory bound: an optimal algorithm
In a recent paper (Preparata et al., 1999) we introduced a novel probing scheme for DNA sequencing by hybridization (SBH). The new gapped-probe scheme combines natural and univers...
Franco P. Preparata, Eli Upfal
ICDCS
2006
IEEE
15 years 3 months ago
Distributed Computing for Efficient Hyperspectral Imaging Using Fully Heterogeneous Networks of Workstations
Hyperspectral imaging is a new technique which has become increasingly important in many remote sensing applications, including automatic target recognition for military and defen...
Antonio Plaza, Javier Plaza, David Valencia